Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.49□□□□□ -0.73
Rpl39P62892 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.49□□□□□ -0.73
Rpl39P62892 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.49□□□□□ -0.73
Rpl39P62892 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rpl39P62892 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.49□□□□□ -0.73
Rpl39P62892 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Rpl39P62892 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.49□□□□□ -0.73
Rpl39P62892 Gm25745-201ENSMUST00000174945 133 ntBASIC10.49□□□□□ -0.73
Rpl39P62892 Mir3081-201ENSMUST00000175305 84 ntBASIC10.49□□□□□ -0.73
Rpl39P62892 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Rpl39P62892 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC10.49□□□□□ -0.73
Rpl39P62892 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rpl39P62892 Gm17808-201ENSMUST00000200859 894 ntBASIC10.49□□□□□ -0.73
Rpl39P62892 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.49□□□□□ -0.73
Rpl39P62892 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rpl39P62892 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rpl39P62892 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rpl39P62892 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
Rpl39P62892 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rpl39P62892 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Rpl39P62892 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.48□□□□□ -0.73
Rpl39P62892 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Rpl39P62892 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Gm4459-201ENSMUST00000118750 468 ntBASIC10.48□□□□□ -0.73
Rpl39P62892 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.48□□□□□ -0.73
Rpl39P62892 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.48□□□□□ -0.73
Rpl39P62892 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rpl39P62892 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rpl39P62892 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rpl39P62892 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rpl39P62892 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.48□□□□□ -0.73
Rpl39P62892 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.48□□□□□ -0.73
Rpl39P62892 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rpl39P62892 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC10.47□□□□□ -0.73
Rpl39P62892 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.47□□□□□ -0.73
Rpl39P62892 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rpl39P62892 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.47□□□□□ -0.73
Rpl39P62892 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rpl39P62892 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms