Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.53□□□□□ -0.72
Cks1bP61025 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.53□□□□□ -0.72
Cks1bP61025 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Cks1bP61025 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC10.53□□□□□ -0.72
Cks1bP61025 Gm44430-201ENSMUST00000203376 995 ntBASIC10.53□□□□□ -0.72
Cks1bP61025 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.53□□□□□ -0.72
Cks1bP61025 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cks1bP61025 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.53□□□□□ -0.72
Cks1bP61025 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cks1bP61025 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Cks1bP61025 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.72
Cks1bP61025 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cks1bP61025 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cks1bP61025 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Cks1bP61025 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cks1bP61025 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Cks1bP61025 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Gm6257-201ENSMUST00000163864 910 ntBASIC10.52□□□□□ -0.73
Cks1bP61025 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Cks1bP61025 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.52□□□□□ -0.73
Cks1bP61025 Gm18959-201ENSMUST00000208954 655 ntBASIC10.52□□□□□ -0.73
Cks1bP61025 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.52□□□□□ -0.73
Cks1bP61025 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Cks1bP61025 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 BC037039-201ENSMUST00000192003 2205 ntBASIC10.52□□□□□ -0.73
Cks1bP61025 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cks1bP61025 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.51□□□□□ -0.73
Cks1bP61025 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cks1bP61025 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cks1bP61025 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Mmp14-206ENSMUST00000225641 3238 ntBASIC10.51□□□□□ -0.73
Cks1bP61025 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cks1bP61025 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Cks1bP61025 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.51□□□□□ -0.73
Cks1bP61025 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.51□□□□□ -0.73
Cks1bP61025 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cks1bP61025 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.51□□□□□ -0.73
Cks1bP61025 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.51□□□□□ -0.73
Cks1bP61025 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cks1bP61025 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cks1bP61025 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cks1bP61025 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms