Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Gm14928-201ENSMUST00000120198 477 ntBASIC19.74■□□□□ 0.75
Nphp4P59240 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.74■□□□□ 0.75
Nphp4P59240 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC19.74■□□□□ 0.75
Nphp4P59240 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC19.74■□□□□ 0.75
Nphp4P59240 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC19.74■□□□□ 0.75
Nphp4P59240 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.74■□□□□ 0.75
Nphp4P59240 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC19.73■□□□□ 0.75
Nphp4P59240 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nphp4P59240 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC19.73■□□□□ 0.75
Nphp4P59240 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.73■□□□□ 0.75
Nphp4P59240 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC19.73■□□□□ 0.75
Nphp4P59240 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nphp4P59240 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC19.73■□□□□ 0.75
Nphp4P59240 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nphp4P59240 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nphp4P59240 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nphp4P59240 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Gm8515-201ENSMUST00000194852 576 ntBASIC19.72■□□□□ 0.75
Nphp4P59240 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.72■□□□□ 0.75
Nphp4P59240 Gm18624-201ENSMUST00000220966 658 ntBASIC19.72■□□□□ 0.75
Nphp4P59240 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.72■□□□□ 0.75
Nphp4P59240 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.72■□□□□ 0.75
Nphp4P59240 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC19.72■□□□□ 0.75
Nphp4P59240 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.72■□□□□ 0.75
Nphp4P59240 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nphp4P59240 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nphp4P59240 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Ssr1-204ENSMUST00000225319 1610 ntBASIC19.71■□□□□ 0.75
Nphp4P59240 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nphp4P59240 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC19.71■□□□□ 0.75
Nphp4P59240 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Ldha-ps-201ENSMUST00000119390 995 ntBASIC19.71■□□□□ 0.75
Nphp4P59240 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nphp4P59240 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nphp4P59240 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC19.71■□□□□ 0.75
Nphp4P59240 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nphp4P59240 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Gm21470-201ENSMUST00000187680 696 ntBASIC19.7■□□□□ 0.74
Nphp4P59240 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC19.7■□□□□ 0.74
Nphp4P59240 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Gm15823-201ENSMUST00000064305 670 ntBASIC19.7■□□□□ 0.74
Nphp4P59240 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nphp4P59240 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.7■□□□□ 0.74
Nphp4P59240 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Nphp4P59240 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nphp4P59240 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nphp4P59240 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Nphp4P59240 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC19.7■□□□□ 0.74
Nphp4P59240 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC19.7■□□□□ 0.74
Nphp4P59240 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms