Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nup43P59235 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nup43P59235 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nup43P59235 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup43P59235 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.89□□□□□ -0.19
Nup43P59235 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.89□□□□□ -0.19
Nup43P59235 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nup43P59235 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nup43P59235 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Nup43P59235 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nup43P59235 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Gm6973-201ENSMUST00000117080 721 ntBASIC13.88□□□□□ -0.19
Nup43P59235 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.88□□□□□ -0.19
Nup43P59235 Gm11543-201ENSMUST00000120758 370 ntBASIC13.88□□□□□ -0.19
Nup43P59235 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.88□□□□□ -0.19
Nup43P59235 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Nup43P59235 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.88□□□□□ -0.19
Nup43P59235 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Nup43P59235 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nup43P59235 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nup43P59235 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nup43P59235 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Gm11745-201ENSMUST00000121669 448 ntBASIC13.87□□□□□ -0.19
Nup43P59235 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.87□□□□□ -0.19
Nup43P59235 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Rprl2-201ENSMUST00000157150 290 ntBASIC13.87□□□□□ -0.19
Nup43P59235 Gm6736-201ENSMUST00000166583 948 ntBASIC13.87□□□□□ -0.19
Nup43P59235 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.87□□□□□ -0.19
Nup43P59235 Gm27702-201ENSMUST00000184512 56 ntBASIC13.87□□□□□ -0.19
Nup43P59235 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.87□□□□□ -0.19
Nup43P59235 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Nup43P59235 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nup43P59235 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Nup43P59235 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.87□□□□□ -0.19
Nup43P59235 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Nup43P59235 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Nup43P59235 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nup43P59235 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nup43P59235 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nup43P59235 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.86□□□□□ -0.19
Nup43P59235 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Nup43P59235 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Nup43P59235 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.86□□□□□ -0.19
Nup43P59235 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms