Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm12895-201ENSMUST00000122214 226 ntBASIC11.9□□□□□ -0.5
Sssca1P56873 Gm7284-201ENSMUST00000131667 944 ntBASIC11.9□□□□□ -0.5
Sssca1P56873 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.9□□□□□ -0.5
Sssca1P56873 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.9□□□□□ -0.5
Sssca1P56873 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Gm27646-201ENSMUST00000183989 110 ntBASIC11.9□□□□□ -0.5
Sssca1P56873 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Sssca1P56873 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sssca1P56873 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sssca1P56873 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Sssca1P56873 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sssca1P56873 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sssca1P56873 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sssca1P56873 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Sssca1P56873 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sssca1P56873 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sssca1P56873 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sssca1P56873 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sssca1P56873 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Gm27357-201ENSMUST00000183754 135 ntBASIC11.89□□□□□ -0.51
Sssca1P56873 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.89□□□□□ -0.51
Sssca1P56873 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.89□□□□□ -0.51
Sssca1P56873 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC11.89□□□□□ -0.51
Sssca1P56873 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sssca1P56873 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.89□□□□□ -0.51
Sssca1P56873 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sssca1P56873 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.88□□□□□ -0.51
Sssca1P56873 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.88□□□□□ -0.51
Sssca1P56873 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sssca1P56873 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.88□□□□□ -0.51
Sssca1P56873 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sssca1P56873 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Sssca1P56873 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.88□□□□□ -0.51
Sssca1P56873 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.88□□□□□ -0.51
Sssca1P56873 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.88□□□□□ -0.51
Sssca1P56873 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sssca1P56873 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms