Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.63□□□□□ -0.55
Rab4aP56371 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rab4aP56371 Gm44450-201ENSMUST00000199528 114 ntBASIC11.63□□□□□ -0.55
Rab4aP56371 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Rab4aP56371 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.63□□□□□ -0.55
Rab4aP56371 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.63□□□□□ -0.55
Rab4aP56371 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rab4aP56371 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rab4aP56371 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Rab4aP56371 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.62□□□□□ -0.55
Rab4aP56371 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Rab4aP56371 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rab4aP56371 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Rab4aP56371 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rab4aP56371 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rab4aP56371 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Rab4aP56371 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Rab4aP56371 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.62□□□□□ -0.55
Rab4aP56371 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rab4aP56371 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rab4aP56371 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.61□□□□□ -0.55
Rab4aP56371 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rab4aP56371 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.61□□□□□ -0.55
Rab4aP56371 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Rab4aP56371 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.61□□□□□ -0.55
Rab4aP56371 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rab4aP56371 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.61□□□□□ -0.55
Rab4aP56371 Gm23547-201ENSMUST00000158210 271 ntBASIC11.61□□□□□ -0.55
Rab4aP56371 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Rab4aP56371 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rab4aP56371 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.61□□□□□ -0.55
Rab4aP56371 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rab4aP56371 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rab4aP56371 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rab4aP56371 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.6□□□□□ -0.55
Rab4aP56371 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rab4aP56371 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rab4aP56371 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rab4aP56371 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms