Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm27628-201ENSMUST00000184911 107 ntBASIC13.42□□□□□ -0.26
Cdh11P55288 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.42□□□□□ -0.26
Cdh11P55288 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.42□□□□□ -0.26
Cdh11P55288 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Cdh11P55288 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cdh11P55288 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cdh11P55288 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Cdh11P55288 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cdh11P55288 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Cdh11P55288 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdh11P55288 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdh11P55288 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.41□□□□□ -0.26
Cdh11P55288 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.41□□□□□ -0.26
Cdh11P55288 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.41□□□□□ -0.26
Cdh11P55288 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdh11P55288 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Cdh11P55288 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.41□□□□□ -0.26
Cdh11P55288 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.41□□□□□ -0.26
Cdh11P55288 Gm5264-201ENSMUST00000190584 848 ntBASIC13.41□□□□□ -0.26
Cdh11P55288 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Cdh11P55288 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Cdh11P55288 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdh11P55288 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cdh11P55288 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.4□□□□□ -0.26
Cdh11P55288 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdh11P55288 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Gm11779-201ENSMUST00000118541 368 ntBASIC13.4□□□□□ -0.26
Cdh11P55288 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.4□□□□□ -0.26
Cdh11P55288 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Cdh11P55288 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.4□□□□□ -0.26
Cdh11P55288 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdh11P55288 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdh11P55288 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Cdh11P55288 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdh11P55288 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cdh11P55288 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdh11P55288 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cdh11P55288 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.39□□□□□ -0.27
Cdh11P55288 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdh11P55288 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cdh11P55288 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.39□□□□□ -0.27
Cdh11P55288 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.39□□□□□ -0.27
Cdh11P55288 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdh11P55288 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms