Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm12091-201ENSMUST00000146791 830 ntBASIC18.53■□□□□ 0.56
Msh6P54276 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.53■□□□□ 0.56
Msh6P54276 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Msh6P54276 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh6P54276 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh6P54276 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh6P54276 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh6P54276 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh6P54276 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh6P54276 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh6P54276 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.52■□□□□ 0.55
Msh6P54276 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.52■□□□□ 0.55
Msh6P54276 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Msh6P54276 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC18.52■□□□□ 0.55
Msh6P54276 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.52■□□□□ 0.55
Msh6P54276 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Msh6P54276 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Msh6P54276 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC18.51■□□□□ 0.55
Msh6P54276 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.51■□□□□ 0.55
Msh6P54276 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Gm45453-201ENSMUST00000211758 853 ntBASIC18.51■□□□□ 0.55
Msh6P54276 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.51■□□□□ 0.55
Msh6P54276 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.51■□□□□ 0.55
Msh6P54276 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.51■□□□□ 0.55
Msh6P54276 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.51■□□□□ 0.55
Msh6P54276 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Msh6P54276 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.51■□□□□ 0.55
Msh6P54276 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Msh6P54276 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.5■□□□□ 0.55
Msh6P54276 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.5■□□□□ 0.55
Msh6P54276 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Msh6P54276 Gm37917-201ENSMUST00000194711 392 ntBASIC18.5■□□□□ 0.55
Msh6P54276 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.5■□□□□ 0.55
Msh6P54276 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Msh6P54276 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Msh6P54276 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Msh6P54276 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Msh6P54276 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.49■□□□□ 0.55
Msh6P54276 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.49■□□□□ 0.55
Msh6P54276 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.49■□□□□ 0.55
Msh6P54276 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.49■□□□□ 0.55
Msh6P54276 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.49■□□□□ 0.55
Msh6P54276 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Msh6P54276 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.49■□□□□ 0.55
Msh6P54276 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.49■□□□□ 0.55
Msh6P54276 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Msh6P54276 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Msh6P54276 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Msh6P54276 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.48■□□□□ 0.55
Msh6P54276 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.48■□□□□ 0.55
Msh6P54276 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Msh6P54276 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms