Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.7□□□□□ -0.06
Fdft1P53798 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Fdft1P53798 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Fdft1P53798 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Fdft1P53798 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.7□□□□□ -0.06
Fdft1P53798 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Fdft1P53798 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
Fdft1P53798 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
Fdft1P53798 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.7□□□□□ -0.06
Fdft1P53798 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.69□□□□□ -0.06
Fdft1P53798 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.69□□□□□ -0.06
Fdft1P53798 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Fdft1P53798 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.69□□□□□ -0.06
Fdft1P53798 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Fdft1P53798 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Gm27300-201ENSMUST00000184085 97 ntBASIC14.69□□□□□ -0.06
Fdft1P53798 Gm27335-201ENSMUST00000184758 97 ntBASIC14.69□□□□□ -0.06
Fdft1P53798 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.69□□□□□ -0.06
Fdft1P53798 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.69□□□□□ -0.06
Fdft1P53798 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Fdft1P53798 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.69□□□□□ -0.06
Fdft1P53798 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Fdft1P53798 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Fdft1P53798 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Fdft1P53798 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Fdft1P53798 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.68□□□□□ -0.06
Fdft1P53798 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.68□□□□□ -0.06
Fdft1P53798 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Fdft1P53798 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Fdft1P53798 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.68□□□□□ -0.06
Fdft1P53798 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.68□□□□□ -0.06
Fdft1P53798 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Fdft1P53798 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Fdft1P53798 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.68□□□□□ -0.06
Fdft1P53798 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Fdft1P53798 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Fdft1P53798 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fdft1P53798 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.67□□□□□ -0.06
Fdft1P53798 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.67□□□□□ -0.06
Fdft1P53798 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Fdft1P53798 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms