Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.16□□□□□ -0.14
Lbx1P52955 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lbx1P52955 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Lbx1P52955 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Lbx1P52955 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lbx1P52955 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Gm19184-201ENSMUST00000196798 928 ntBASIC14.16□□□□□ -0.14
Lbx1P52955 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.16□□□□□ -0.14
Lbx1P52955 Gm43118-201ENSMUST00000199149 775 ntBASIC14.16□□□□□ -0.14
Lbx1P52955 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.16□□□□□ -0.14
Lbx1P52955 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.16□□□□□ -0.14
Lbx1P52955 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Lbx1P52955 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lbx1P52955 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lbx1P52955 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lbx1P52955 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.15□□□□□ -0.14
Lbx1P52955 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.15□□□□□ -0.14
Lbx1P52955 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.15□□□□□ -0.14
Lbx1P52955 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.15□□□□□ -0.14
Lbx1P52955 Mir6979-201ENSMUST00000183927 56 ntBASIC14.15□□□□□ -0.14
Lbx1P52955 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.15□□□□□ -0.14
Lbx1P52955 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lbx1P52955 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.15□□□□□ -0.14
Lbx1P52955 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lbx1P52955 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Lbx1P52955 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Lbx1P52955 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Lbx1P52955 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Lbx1P52955 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lbx1P52955 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Lbx1P52955 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Lbx1P52955 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.14□□□□□ -0.15
Lbx1P52955 Gm38341-201ENSMUST00000195357 515 ntBASIC14.14□□□□□ -0.15
Lbx1P52955 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.14□□□□□ -0.15
Lbx1P52955 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lbx1P52955 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lbx1P52955 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lbx1P52955 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.14□□□□□ -0.15
Lbx1P52955 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lbx1P52955 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lbx1P52955 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.13□□□□□ -0.15
Lbx1P52955 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lbx1P52955 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lbx1P52955 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lbx1P52955 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lbx1P52955 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lbx1P52955 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms