Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pdx1P52946 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.54□□□□□ -0.08
Pdx1P52946 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pdx1P52946 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pdx1P52946 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdx1P52946 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdx1P52946 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.53□□□□□ -0.08
Pdx1P52946 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Pdx1P52946 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdx1P52946 Gm6973-201ENSMUST00000117080 721 ntBASIC14.53□□□□□ -0.08
Pdx1P52946 Gm11745-201ENSMUST00000121669 448 ntBASIC14.53□□□□□ -0.08
Pdx1P52946 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Gm9726-201ENSMUST00000180321 678 ntBASIC14.53□□□□□ -0.08
Pdx1P52946 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.53□□□□□ -0.08
Pdx1P52946 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Pdx1P52946 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Pdx1P52946 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Pdx1P52946 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pdx1P52946 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.53□□□□□ -0.08
Pdx1P52946 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pdx1P52946 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pdx1P52946 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Pdx1P52946 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pdx1P52946 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.52□□□□□ -0.09
Pdx1P52946 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.52□□□□□ -0.09
Pdx1P52946 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Pdx1P52946 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.52□□□□□ -0.09
Pdx1P52946 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pdx1P52946 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdx1P52946 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdx1P52946 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdx1P52946 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pdx1P52946 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Pdx1P52946 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Pdx1P52946 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.51□□□□□ -0.09
Pdx1P52946 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.51□□□□□ -0.09
Pdx1P52946 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdx1P52946 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.51□□□□□ -0.09
Pdx1P52946 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pdx1P52946 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms