Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.07■□□□□ 0
SftpbP50405 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.07■□□□□ 0
SftpbP50405 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SftpbP50405 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.07■□□□□ 0
SftpbP50405 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SftpbP50405 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
SftpbP50405 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SftpbP50405 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.07■□□□□ 0
SftpbP50405 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
SftpbP50405 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SftpbP50405 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
SftpbP50405 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SftpbP50405 Gm12008-201ENSMUST00000117791 755 ntBASIC15.06■□□□□ 0
SftpbP50405 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.06■□□□□ 0
SftpbP50405 Gm7787-201ENSMUST00000216858 688 ntBASIC15.06■□□□□ 0
SftpbP50405 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
SftpbP50405 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SftpbP50405 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.06■□□□□ 0
SftpbP50405 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.06■□□□□ 0
SftpbP50405 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SftpbP50405 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SftpbP50405 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SftpbP50405 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SftpbP50405 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SftpbP50405 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SftpbP50405 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SftpbP50405 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.05■□□□□ -0
SftpbP50405 Gm24589-201ENSMUST00000116692 94 ntBASIC15.05■□□□□ -0
SftpbP50405 Gm45167-201ENSMUST00000208007 322 ntBASIC15.05■□□□□ -0
SftpbP50405 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
SftpbP50405 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.05■□□□□ -0
SftpbP50405 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.05■□□□□ -0
SftpbP50405 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC15.05■□□□□ -0
SftpbP50405 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SftpbP50405 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SftpbP50405 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.05■□□□□ -0
SftpbP50405 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SftpbP50405 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ -0
SftpbP50405 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SftpbP50405 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SftpbP50405 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.04■□□□□ -0
SftpbP50405 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SftpbP50405 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.04■□□□□ -0
SftpbP50405 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.04■□□□□ -0
SftpbP50405 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.04■□□□□ -0
SftpbP50405 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.04■□□□□ -0
SftpbP50405 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SftpbP50405 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SftpbP50405 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SftpbP50405 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.03■□□□□ -0
SftpbP50405 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.03■□□□□ -0
SftpbP50405 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SftpbP50405 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SftpbP50405 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SftpbP50405 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SftpbP50405 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SftpbP50405 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.03■□□□□ -0
SftpbP50405 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.03■□□□□ -0
SftpbP50405 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.03■□□□□ -0
SftpbP50405 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SftpbP50405 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.03■□□□□ -0
SftpbP50405 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SftpbP50405 Rps4l-201ENSMUST00000071745 943 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms