Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Gm27704-201ENSMUST00000185094 107 ntBASIC12.21□□□□□ -0.45
Nkx2-1P50220 Gm33142-201ENSMUST00000193913 867 ntBASIC12.21□□□□□ -0.45
Nkx2-1P50220 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.21□□□□□ -0.45
Nkx2-1P50220 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.21□□□□□ -0.45
Nkx2-1P50220 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Nkx2-1P50220 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-1P50220 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.21□□□□□ -0.46
Nkx2-1P50220 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-1P50220 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-1P50220 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-1P50220 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-1P50220 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-1P50220 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-1P50220 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx2-1P50220 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.21□□□□□ -0.46
Nkx2-1P50220 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Gm8318-201ENSMUST00000182954 872 ntBASIC12.2□□□□□ -0.46
Nkx2-1P50220 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-1P50220 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.19□□□□□ -0.46
Nkx2-1P50220 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Gm18622-201ENSMUST00000219361 595 ntBASIC12.19□□□□□ -0.46
Nkx2-1P50220 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.19□□□□□ -0.46
Nkx2-1P50220 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-1P50220 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.18□□□□□ -0.46
Nkx2-1P50220 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms