Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.9□□□□□ -0.18
Nkx2-6P43688 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Gm27680-201ENSMUST00000184192 160 ntBASIC13.9□□□□□ -0.18
Nkx2-6P43688 Gm18766-201ENSMUST00000189811 808 ntBASIC13.9□□□□□ -0.18
Nkx2-6P43688 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-6P43688 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.9□□□□□ -0.18
Nkx2-6P43688 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.9□□□□□ -0.18
Nkx2-6P43688 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.9□□□□□ -0.18
Nkx2-6P43688 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-6P43688 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.9□□□□□ -0.19
Nkx2-6P43688 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-6P43688 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
Nkx2-6P43688 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
Nkx2-6P43688 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Gm12428-201ENSMUST00000119844 727 ntBASIC13.89□□□□□ -0.19
Nkx2-6P43688 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.89□□□□□ -0.19
Nkx2-6P43688 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-6P43688 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Nkx2-6P43688 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.88□□□□□ -0.19
Nkx2-6P43688 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Gm14767-201ENSMUST00000121559 586 ntBASIC13.88□□□□□ -0.19
Nkx2-6P43688 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.88□□□□□ -0.19
Nkx2-6P43688 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.88□□□□□ -0.19
Nkx2-6P43688 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.88□□□□□ -0.19
Nkx2-6P43688 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nkx2-6P43688 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nkx2-6P43688 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms