Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.21□□□□□ -0.14
Tnfsf4P43488 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf4P43488 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tnfsf4P43488 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.2□□□□□ -0.14
Tnfsf4P43488 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.2□□□□□ -0.14
Tnfsf4P43488 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.2□□□□□ -0.14
Tnfsf4P43488 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Gm15173-201ENSMUST00000122049 433 ntBASIC14.2□□□□□ -0.14
Tnfsf4P43488 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Gm6550-201ENSMUST00000187574 993 ntBASIC14.2□□□□□ -0.14
Tnfsf4P43488 Gm7977-201ENSMUST00000193787 748 ntBASIC14.2□□□□□ -0.14
Tnfsf4P43488 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tnfsf4P43488 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tnfsf4P43488 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.19□□□□□ -0.14
Tnfsf4P43488 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.19□□□□□ -0.14
Tnfsf4P43488 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfsf4P43488 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.18□□□□□ -0.14
Tnfsf4P43488 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.18□□□□□ -0.14
Tnfsf4P43488 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.18□□□□□ -0.14
Tnfsf4P43488 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.18□□□□□ -0.14
Tnfsf4P43488 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.18□□□□□ -0.14
Tnfsf4P43488 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfsf4P43488 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms