Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.04■□□□□ -0
Cxcl12P40224 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cxcl12P40224 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cxcl12P40224 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Cxcl12P40224 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.03■□□□□ -0
Cxcl12P40224 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.03■□□□□ -0
Cxcl12P40224 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.03■□□□□ -0
Cxcl12P40224 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Cxcl12P40224 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cxcl12P40224 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cxcl12P40224 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.02■□□□□ -0
Cxcl12P40224 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.02■□□□□ -0
Cxcl12P40224 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Cxcl12P40224 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.02■□□□□ -0
Cxcl12P40224 Olfr286-202ENSMUST00000205305 969 ntBASIC15.02■□□□□ -0
Cxcl12P40224 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Gm17795-201ENSMUST00000214505 757 ntBASIC15.02■□□□□ -0
Cxcl12P40224 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.02■□□□□ -0
Cxcl12P40224 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.02■□□□□ -0
Cxcl12P40224 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cxcl12P40224 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl12P40224 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cxcl12P40224 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl12P40224 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl12P40224 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl12P40224 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl12P40224 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl12P40224 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cxcl12P40224 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cxcl12P40224 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.01□□□□□ -0.01
Cxcl12P40224 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Cxcl12P40224 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cxcl12P40224 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.01□□□□□ -0.01
Cxcl12P40224 Gm27731-201ENSMUST00000185192 107 ntBASIC15.01□□□□□ -0.01
Cxcl12P40224 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.01□□□□□ -0.01
Cxcl12P40224 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cxcl12P40224 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.01□□□□□ -0.01
Cxcl12P40224 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms