Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Chd1P40201 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Chd1P40201 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC21.72■■□□□ 1.07
Chd1P40201 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC21.72■■□□□ 1.07
Chd1P40201 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC21.72■■□□□ 1.07
Chd1P40201 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC21.72■■□□□ 1.07
Chd1P40201 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC21.72■■□□□ 1.07
Chd1P40201 AC073947.2-201ENSMUST00000215888 1130 ntBASIC21.72■■□□□ 1.07
Chd1P40201 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd1P40201 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Chd1P40201 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Chd1P40201 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC21.71■■□□□ 1.07
Chd1P40201 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC21.71■■□□□ 1.07
Chd1P40201 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC21.71■■□□□ 1.07
Chd1P40201 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC21.71■■□□□ 1.07
Chd1P40201 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Gm5069-202ENSMUST00000192714 1011 ntBASIC21.71■■□□□ 1.07
Chd1P40201 Gm42929-201ENSMUST00000198374 1286 ntBASIC21.71■■□□□ 1.07
Chd1P40201 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd1P40201 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Chd1P40201 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Chd1P40201 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC21.7■■□□□ 1.06
Chd1P40201 AC159196.2-201ENSMUST00000224082 1622 ntBASIC21.7■■□□□ 1.06
Chd1P40201 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Chd1P40201 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Chd1P40201 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Chd1P40201 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Chd1P40201 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Chd1P40201 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Chd1P40201 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC21.7■■□□□ 1.06
Chd1P40201 Gm29608-201ENSMUST00000190444 463 ntBASIC21.7■■□□□ 1.06
Chd1P40201 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC21.7■■□□□ 1.06
Chd1P40201 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Chd1P40201 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 AC163637.1-201ENSMUST00000215491 1894 ntBASIC21.7■■□□□ 1.06
Chd1P40201 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd1P40201 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC21.69■■□□□ 1.06
Chd1P40201 Gm4935-201ENSMUST00000221316 1198 ntBASIC21.69■■□□□ 1.06
Chd1P40201 Gm29787-201ENSMUST00000222129 849 ntBASIC21.69■■□□□ 1.06
Chd1P40201 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC21.69■■□□□ 1.06
Chd1P40201 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Chd1P40201 Gm6082-201ENSMUST00000215204 454 ntBASIC21.69■■□□□ 1.06
Chd1P40201 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd1P40201 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Chd1P40201 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Chd1P40201 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 Gm5637-201ENSMUST00000153890 1119 ntBASIC21.68■■□□□ 1.06
Chd1P40201 Gm43138-201ENSMUST00000199123 708 ntBASIC21.68■■□□□ 1.06
Chd1P40201 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chd1P40201 AC132384.14-201ENSMUST00000219346 1147 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms