Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Upk2P38575 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.89□□□□□ -0.35
Upk2P38575 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk2P38575 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk2P38575 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk2P38575 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.89□□□□□ -0.35
Upk2P38575 Mir8117-201ENSMUST00000184773 107 ntBASIC12.89□□□□□ -0.35
Upk2P38575 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.89□□□□□ -0.35
Upk2P38575 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Upk2P38575 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.89□□□□□ -0.35
Upk2P38575 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Upk2P38575 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.89□□□□□ -0.35
Upk2P38575 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Upk2P38575 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.88□□□□□ -0.35
Upk2P38575 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk2P38575 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.88□□□□□ -0.35
Upk2P38575 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk2P38575 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Upk2P38575 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Upk2P38575 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Upk2P38575 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Upk2P38575 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upk2P38575 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Upk2P38575 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upk2P38575 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Upk2P38575 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.87□□□□□ -0.35
Upk2P38575 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upk2P38575 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Upk2P38575 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.87□□□□□ -0.35
Upk2P38575 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.87□□□□□ -0.35
Upk2P38575 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Gm44492-201ENSMUST00000197012 141 ntBASIC12.87□□□□□ -0.35
Upk2P38575 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Gm18206-201ENSMUST00000207027 926 ntBASIC12.87□□□□□ -0.35
Upk2P38575 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Upk2P38575 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Upk2P38575 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.87□□□□□ -0.35
Upk2P38575 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Upk2P38575 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Upk2P38575 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms