Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Sftpa1P35242 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Gm17150-201ENSMUST00000165577 381 ntBASIC13.53□□□□□ -0.24
Sftpa1P35242 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.53□□□□□ -0.24
Sftpa1P35242 Mir6392-201ENSMUST00000184924 108 ntBASIC13.53□□□□□ -0.24
Sftpa1P35242 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Gm43630-201ENSMUST00000201550 776 ntBASIC13.53□□□□□ -0.24
Sftpa1P35242 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Gm9229-201ENSMUST00000222777 126 ntBASIC13.53□□□□□ -0.24
Sftpa1P35242 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.53□□□□□ -0.24
Sftpa1P35242 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sftpa1P35242 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sftpa1P35242 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sftpa1P35242 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sftpa1P35242 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sftpa1P35242 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sftpa1P35242 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sftpa1P35242 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sftpa1P35242 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Sftpa1P35242 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.52□□□□□ -0.24
Sftpa1P35242 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sftpa1P35242 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Sftpa1P35242 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.52□□□□□ -0.25
Sftpa1P35242 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.52□□□□□ -0.25
Sftpa1P35242 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Mir1938-201ENSMUST00000158746 100 ntBASIC13.52□□□□□ -0.25
Sftpa1P35242 Gm45453-201ENSMUST00000211758 853 ntBASIC13.52□□□□□ -0.25
Sftpa1P35242 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sftpa1P35242 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Sftpa1P35242 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.52□□□□□ -0.25
Sftpa1P35242 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sftpa1P35242 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.52□□□□□ -0.25
Sftpa1P35242 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.52□□□□□ -0.25
Sftpa1P35242 App-207ENSMUST00000227737 2827 ntBASIC13.52□□□□□ -0.25
Sftpa1P35242 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sftpa1P35242 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sftpa1P35242 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Sftpa1P35242 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.51□□□□□ -0.25
Sftpa1P35242 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.51□□□□□ -0.25
Sftpa1P35242 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.51□□□□□ -0.25
Sftpa1P35242 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.51□□□□□ -0.25
Sftpa1P35242 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.51□□□□□ -0.25
Sftpa1P35242 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.51□□□□□ -0.25
Sftpa1P35242 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sftpa1P35242 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms