Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Slc6a1P31648 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a1P31648 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a1P31648 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a1P31648 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.65□□□□□ -0.38
Slc6a1P31648 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Gm44430-201ENSMUST00000203376 995 ntBASIC12.65□□□□□ -0.38
Slc6a1P31648 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.65□□□□□ -0.38
Slc6a1P31648 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.65□□□□□ -0.38
Slc6a1P31648 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Slc6a1P31648 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a1P31648 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Slc6a1P31648 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Slc6a1P31648 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a1P31648 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Slc6a1P31648 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.64□□□□□ -0.39
Slc6a1P31648 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Slc6a1P31648 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.64□□□□□ -0.39
Slc6a1P31648 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Slc6a1P31648 Gm13312-201ENSMUST00000119631 718 ntBASIC12.64□□□□□ -0.39
Slc6a1P31648 Olfr129-201ENSMUST00000122318 993 ntBASIC12.64□□□□□ -0.39
Slc6a1P31648 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.64□□□□□ -0.39
Slc6a1P31648 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms