Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pde6aP27664 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pde6aP27664 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pde6aP27664 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pde6aP27664 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Pde6aP27664 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.03■□□□□ 0.32
Pde6aP27664 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.03■□□□□ 0.32
Pde6aP27664 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Pde6aP27664 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pde6aP27664 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pde6aP27664 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pde6aP27664 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.02■□□□□ 0.32
Pde6aP27664 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.02■□□□□ 0.32
Pde6aP27664 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.02■□□□□ 0.32
Pde6aP27664 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pde6aP27664 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.02■□□□□ 0.32
Pde6aP27664 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6aP27664 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6aP27664 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
Pde6aP27664 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6aP27664 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6aP27664 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pde6aP27664 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pde6aP27664 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.01■□□□□ 0.31
Pde6aP27664 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Pde6aP27664 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pde6aP27664 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pde6aP27664 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pde6aP27664 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.01■□□□□ 0.31
Pde6aP27664 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.01■□□□□ 0.31
Pde6aP27664 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pde6aP27664 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.01■□□□□ 0.31
Pde6aP27664 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pde6aP27664 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6aP27664 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17■□□□□ 0.31
Pde6aP27664 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6aP27664 Gm6756-201ENSMUST00000180647 1620 ntBASIC17■□□□□ 0.31
Pde6aP27664 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6aP27664 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6aP27664 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17■□□□□ 0.31
Pde6aP27664 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17■□□□□ 0.31
Pde6aP27664 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17■□□□□ 0.31
Pde6aP27664 Gm26308-201ENSMUST00000157768 69 ntBASIC17■□□□□ 0.31
Pde6aP27664 Gm23547-201ENSMUST00000158210 271 ntBASIC17■□□□□ 0.31
Pde6aP27664 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17■□□□□ 0.31
Pde6aP27664 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17■□□□□ 0.31
Pde6aP27664 Gm38225-201ENSMUST00000194001 393 ntBASIC17■□□□□ 0.31
Pde6aP27664 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Pde6aP27664 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17■□□□□ 0.31
Pde6aP27664 Gm9182-201ENSMUST00000217829 639 ntBASIC17■□□□□ 0.31
Pde6aP27664 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17■□□□□ 0.31
Pde6aP27664 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Pde6aP27664 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6aP27664 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pde6aP27664 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms