Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.28□□□□□ -0.44
Col8a2P25318 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Col8a2P25318 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col8a2P25318 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col8a2P25318 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col8a2P25318 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col8a2P25318 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.27□□□□□ -0.44
Col8a2P25318 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col8a2P25318 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col8a2P25318 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col8a2P25318 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col8a2P25318 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Col8a2P25318 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col8a2P25318 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
Col8a2P25318 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col8a2P25318 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.27□□□□□ -0.44
Col8a2P25318 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col8a2P25318 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.27□□□□□ -0.45
Col8a2P25318 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.27□□□□□ -0.45
Col8a2P25318 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 AA543401-201ENSMUST00000164248 1269 ntBASIC12.27□□□□□ -0.45
Col8a2P25318 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Gm10576-201ENSMUST00000191927 825 ntBASIC12.27□□□□□ -0.45
Col8a2P25318 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.27□□□□□ -0.45
Col8a2P25318 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.27□□□□□ -0.45
Col8a2P25318 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.27□□□□□ -0.45
Col8a2P25318 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.27□□□□□ -0.45
Col8a2P25318 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Col8a2P25318 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.27□□□□□ -0.45
Col8a2P25318 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col8a2P25318 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col8a2P25318 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col8a2P25318 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col8a2P25318 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col8a2P25318 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col8a2P25318 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col8a2P25318 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col8a2P25318 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Gm13464-201ENSMUST00000119418 935 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 Gm11543-201ENSMUST00000120758 370 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.26□□□□□ -0.45
Col8a2P25318 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.26□□□□□ -0.45
Col8a2P25318 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.26□□□□□ -0.45
Col8a2P25318 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Gm5479-201ENSMUST00000160578 435 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.26□□□□□ -0.45
Col8a2P25318 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 Gm2451-201ENSMUST00000199447 999 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 Gm10290-201ENSMUST00000200451 999 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.26□□□□□ -0.45
Col8a2P25318 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col8a2P25318 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.26□□□□□ -0.45
Col8a2P25318 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col8a2P25318 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col8a2P25318 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col8a2P25318 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms