Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
Ctla2aP12399 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ctla2aP12399 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.25□□□□□ -0.29
Ctla2aP12399 Gm18101-201ENSMUST00000215769 548 ntBASIC13.25□□□□□ -0.29
Ctla2aP12399 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ctla2aP12399 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ctla2aP12399 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ctla2aP12399 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ctla2aP12399 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ctla2aP12399 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.24□□□□□ -0.29
Ctla2aP12399 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Ctla2aP12399 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Ctla2aP12399 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.24□□□□□ -0.29
Ctla2aP12399 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Ctla2aP12399 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.24□□□□□ -0.29
Ctla2aP12399 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.24□□□□□ -0.29
Ctla2aP12399 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ctla2aP12399 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ctla2aP12399 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.24□□□□□ -0.29
Ctla2aP12399 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ctla2aP12399 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Ctla2aP12399 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Ctla2aP12399 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ctla2aP12399 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ctla2aP12399 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ctla2aP12399 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.23□□□□□ -0.29
Ctla2aP12399 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Gm27011-201ENSMUST00000182352 972 ntBASIC13.23□□□□□ -0.29
Ctla2aP12399 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.23□□□□□ -0.29
Ctla2aP12399 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.23□□□□□ -0.29
Ctla2aP12399 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.23□□□□□ -0.29
Ctla2aP12399 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ctla2aP12399 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.23□□□□□ -0.29
Ctla2aP12399 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.23□□□□□ -0.29
Ctla2aP12399 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ctla2aP12399 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ctla2aP12399 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.23□□□□□ -0.29
Ctla2aP12399 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ctla2aP12399 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ctla2aP12399 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Ctla2aP12399 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms