Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Gm13829-201ENSMUST00000119600 138 ntBASIC16.24■□□□□ 0.19
Hoxc6P10629 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.24■□□□□ 0.19
Hoxc6P10629 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.24■□□□□ 0.19
Hoxc6P10629 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Hoxc6P10629 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Hoxc6P10629 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc6P10629 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc6P10629 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hoxc6P10629 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hoxc6P10629 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.23■□□□□ 0.19
Hoxc6P10629 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 BC037039-201ENSMUST00000192003 2205 ntBASIC16.23■□□□□ 0.19
Hoxc6P10629 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hoxc6P10629 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Hoxc6P10629 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.22■□□□□ 0.19
Hoxc6P10629 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.22■□□□□ 0.19
Hoxc6P10629 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Hoxc6P10629 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hoxc6P10629 Gm18062-201ENSMUST00000208020 547 ntBASIC16.22■□□□□ 0.19
Hoxc6P10629 Gm18055-201ENSMUST00000208254 547 ntBASIC16.22■□□□□ 0.19
Hoxc6P10629 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.22■□□□□ 0.19
Hoxc6P10629 BC001981-202ENSMUST00000191393 1545 ntBASIC16.22■□□□□ 0.19
Hoxc6P10629 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Hoxc6P10629 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.22■□□□□ 0.19
Hoxc6P10629 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hoxc6P10629 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hoxc6P10629 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.21■□□□□ 0.19
Hoxc6P10629 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Hoxc6P10629 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.21■□□□□ 0.19
Hoxc6P10629 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.21■□□□□ 0.19
Hoxc6P10629 Gm11918-201ENSMUST00000121660 179 ntBASIC16.21■□□□□ 0.19
Hoxc6P10629 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.21■□□□□ 0.19
Hoxc6P10629 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.21■□□□□ 0.19
Hoxc6P10629 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.21■□□□□ 0.19
Hoxc6P10629 Gm19220-201ENSMUST00000222682 803 ntBASIC16.21■□□□□ 0.19
Hoxc6P10629 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Hoxc6P10629 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hoxc6P10629 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms