Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ccl1P10146 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ccl1P10146 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl1P10146 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.41□□□□□ -0.58
Ccl1P10146 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ccl1P10146 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Gm15039-201ENSMUST00000118914 875 ntBASIC11.41□□□□□ -0.58
Ccl1P10146 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.41□□□□□ -0.58
Ccl1P10146 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.41□□□□□ -0.58
Ccl1P10146 Gm45058-201ENSMUST00000205810 766 ntBASIC11.41□□□□□ -0.58
Ccl1P10146 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.41□□□□□ -0.58
Ccl1P10146 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ccl1P10146 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ccl1P10146 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl1P10146 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.41□□□□□ -0.58
Ccl1P10146 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.41□□□□□ -0.58
Ccl1P10146 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ccl1P10146 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ccl1P10146 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Mir770-201ENSMUST00000103252 94 ntBASIC11.4□□□□□ -0.58
Ccl1P10146 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccl1P10146 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.4□□□□□ -0.58
Ccl1P10146 Gm18959-201ENSMUST00000208954 655 ntBASIC11.4□□□□□ -0.58
Ccl1P10146 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.4□□□□□ -0.58
Ccl1P10146 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.4□□□□□ -0.58
Ccl1P10146 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ccl1P10146 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ccl1P10146 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl1P10146 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl1P10146 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl1P10146 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl1P10146 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl1P10146 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ccl1P10146 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.39□□□□□ -0.59
Ccl1P10146 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ccl1P10146 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Ccl1P10146 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ccl1P10146 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.39□□□□□ -0.59
Ccl1P10146 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Gm8520-201ENSMUST00000186517 868 ntBASIC11.39□□□□□ -0.59
Ccl1P10146 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.39□□□□□ -0.59
Ccl1P10146 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC11.39□□□□□ -0.59
Ccl1P10146 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.39□□□□□ -0.59
Ccl1P10146 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Ccl1P10146 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.39□□□□□ -0.59
Ccl1P10146 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ccl1P10146 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ccl1P10146 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms