Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.92□□□□□ -0.18
ApoeP08226 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ApoeP08226 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.92□□□□□ -0.18
ApoeP08226 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Gm23634-201ENSMUST00000175071 91 ntBASIC13.91□□□□□ -0.18
ApoeP08226 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ApoeP08226 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.91□□□□□ -0.18
ApoeP08226 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ApoeP08226 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
ApoeP08226 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.91□□□□□ -0.18
ApoeP08226 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.91□□□□□ -0.18
ApoeP08226 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ApoeP08226 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
ApoeP08226 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.9□□□□□ -0.18
ApoeP08226 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.9□□□□□ -0.18
ApoeP08226 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.9□□□□□ -0.18
ApoeP08226 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ApoeP08226 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ApoeP08226 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.9□□□□□ -0.18
ApoeP08226 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.9□□□□□ -0.18
ApoeP08226 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ApoeP08226 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ApoeP08226 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.9□□□□□ -0.18
ApoeP08226 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ApoeP08226 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
ApoeP08226 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ApoeP08226 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
ApoeP08226 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ApoeP08226 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.89□□□□□ -0.19
ApoeP08226 AA414768-201ENSMUST00000121924 1257 ntBASIC13.89□□□□□ -0.19
ApoeP08226 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ApoeP08226 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms