Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gm4804-201ENSMUST00000182234 999 ntBASIC15.25■□□□□ 0.03
P04214 Gm27839-201ENSMUST00000184242 106 ntBASIC15.25■□□□□ 0.03
P04214 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
P04214 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.25■□□□□ 0.03
P04214 Gm17794-201ENSMUST00000220252 955 ntBASIC15.25■□□□□ 0.03
P04214 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04214 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04214 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04214 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
P04214 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04214 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P04214 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04214 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P04214 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P04214 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
P04214 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.24■□□□□ 0.03
P04214 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
P04214 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.24■□□□□ 0.03
P04214 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.24■□□□□ 0.03
P04214 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
P04214 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P04214 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.24■□□□□ 0.03
P04214 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P04214 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P04214 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
P04214 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.23■□□□□ 0.03
P04214 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P04214 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.23■□□□□ 0.03
P04214 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.23■□□□□ 0.03
P04214 Gm45331-201ENSMUST00000209868 554 ntBASIC15.23■□□□□ 0.03
P04214 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.23■□□□□ 0.03
P04214 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P04214 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.22■□□□□ 0.03
P04214 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.22■□□□□ 0.03
P04214 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P04214 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P04214 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
P04214 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.22■□□□□ 0.03
P04214 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.22■□□□□ 0.03
P04214 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
P04214 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.22■□□□□ 0.03
P04214 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.22■□□□□ 0.03
P04214 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
P04214 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.22■□□□□ 0.03
P04214 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P04214 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.21■□□□□ 0.03
P04214 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P04214 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms