Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm2272-201ENSMUST00000194903 582 ntBASIC14.1□□□□□ -0.15
P04213 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.1□□□□□ -0.15
P04213 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.1□□□□□ -0.15
P04213 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
P04213 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.1□□□□□ -0.15
P04213 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
P04213 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P04213 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.1□□□□□ -0.15
P04213 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.1□□□□□ -0.15
P04213 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.1□□□□□ -0.15
P04213 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.1□□□□□ -0.15
P04213 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04213 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
P04213 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
P04213 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.09□□□□□ -0.15
P04213 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Gm9385-201ENSMUST00000117563 472 ntBASIC14.09□□□□□ -0.15
P04213 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.09□□□□□ -0.15
P04213 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.09□□□□□ -0.15
P04213 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.09□□□□□ -0.15
P04213 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.09□□□□□ -0.15
P04213 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.09□□□□□ -0.15
P04213 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Gm2451-201ENSMUST00000199447 999 ntBASIC14.09□□□□□ -0.15
P04213 Gm10290-201ENSMUST00000200451 999 ntBASIC14.09□□□□□ -0.15
P04213 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.09□□□□□ -0.15
P04213 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.09□□□□□ -0.15
P04213 Gm10154-201ENSMUST00000084445 354 ntBASIC14.09□□□□□ -0.15
P04213 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
P04213 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.09□□□□□ -0.15
P04213 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
P04213 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
P04213 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.09□□□□□ -0.15
P04213 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
P04213 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P04213 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04213 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04213 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
P04213 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
P04213 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04213 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
P04213 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
P04213 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
P04213 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
P04213 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
P04213 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.08□□□□□ -0.16
P04213 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.08□□□□□ -0.16
P04213 Gm16026-204ENSMUST00000162652 683 ntBASIC14.08□□□□□ -0.16
P04213 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
P04213 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.08□□□□□ -0.16
P04213 Gm45747-201ENSMUST00000212203 999 ntBASIC14.08□□□□□ -0.16
P04213 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.08□□□□□ -0.16
P04213 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P04213 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms