Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
H3f3cP02301 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
H3f3cP02301 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H3f3cP02301 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H3f3cP02301 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
H3f3cP02301 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H3f3cP02301 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.62□□□□□ -0.39
H3f3cP02301 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
H3f3cP02301 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.62□□□□□ -0.39
H3f3cP02301 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.62□□□□□ -0.39
H3f3cP02301 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.62□□□□□ -0.39
H3f3cP02301 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.62□□□□□ -0.39
H3f3cP02301 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H3f3cP02301 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
H3f3cP02301 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.61□□□□□ -0.39
H3f3cP02301 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
H3f3cP02301 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Gm44492-201ENSMUST00000197012 141 ntBASIC12.61□□□□□ -0.39
H3f3cP02301 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
H3f3cP02301 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
H3f3cP02301 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
H3f3cP02301 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.61□□□□□ -0.39
H3f3cP02301 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
H3f3cP02301 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
H3f3cP02301 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
H3f3cP02301 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
H3f3cP02301 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3cP02301 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3cP02301 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3cP02301 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3cP02301 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3cP02301 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3cP02301 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
H3f3cP02301 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
H3f3cP02301 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.6□□□□□ -0.39
H3f3cP02301 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.6□□□□□ -0.39
H3f3cP02301 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.6□□□□□ -0.39
H3f3cP02301 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.6□□□□□ -0.39
H3f3cP02301 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.6□□□□□ -0.39
H3f3cP02301 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms