Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Hbb-b1P02088 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hbb-b1P02088 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hbb-b1P02088 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hbb-b1P02088 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hbb-b1P02088 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hbb-b1P02088 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Hbb-b1P02088 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Hbb-b1P02088 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.37□□□□□ -0.75
Hbb-b1P02088 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Hbb-b1P02088 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.36□□□□□ -0.75
Hbb-b1P02088 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC10.36□□□□□ -0.75
Hbb-b1P02088 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Hbb-b1P02088 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Gm38355-201ENSMUST00000192514 1570 ntBASIC10.35□□□□□ -0.75
Hbb-b1P02088 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Hbb-b1P02088 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hbb-b1P02088 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms