Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Abcd4O89016 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd4O89016 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd4O89016 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd4O89016 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd4O89016 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Abcd4O89016 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.33□□□□□ -0.28
Abcd4O89016 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd4O89016 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Abcd4O89016 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Abcd4O89016 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.32□□□□□ -0.28
Abcd4O89016 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Abcd4O89016 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Abcd4O89016 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.32□□□□□ -0.28
Abcd4O89016 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Abcd4O89016 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Abcd4O89016 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Abcd4O89016 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Abcd4O89016 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.32□□□□□ -0.28
Abcd4O89016 Mir6956-201ENSMUST00000183598 62 ntBASIC13.32□□□□□ -0.28
Abcd4O89016 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.32□□□□□ -0.28
Abcd4O89016 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.32□□□□□ -0.28
Abcd4O89016 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Gm43125-201ENSMUST00000201724 730 ntBASIC13.32□□□□□ -0.28
Abcd4O89016 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.32□□□□□ -0.28
Abcd4O89016 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.32□□□□□ -0.28
Abcd4O89016 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Abcd4O89016 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.32□□□□□ -0.28
Abcd4O89016 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Abcd4O89016 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Abcd4O89016 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.31□□□□□ -0.28
Abcd4O89016 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Abcd4O89016 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Abcd4O89016 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Abcd4O89016 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.31□□□□□ -0.28
Abcd4O89016 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Abcd4O89016 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.31□□□□□ -0.28
Abcd4O89016 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.31□□□□□ -0.28
Abcd4O89016 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.31□□□□□ -0.28
Abcd4O89016 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Abcd4O89016 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.31□□□□□ -0.28
Abcd4O89016 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Abcd4O89016 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Abcd4O89016 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.31□□□□□ -0.28
Abcd4O89016 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Abcd4O89016 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Abcd4O89016 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Abcd4O89016 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Abcd4O89016 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Abcd4O89016 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Abcd4O89016 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms