Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sh2d1aO88890 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.42□□□□□ -0.74
Sh2d1aO88890 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sh2d1aO88890 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.41□□□□□ -0.74
Sh2d1aO88890 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.41□□□□□ -0.74
Sh2d1aO88890 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Mir5131-201ENSMUST00000175426 93 ntBASIC10.41□□□□□ -0.74
Sh2d1aO88890 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Gm15590-201ENSMUST00000078419 552 ntBASIC10.41□□□□□ -0.74
Sh2d1aO88890 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Sh2d1aO88890 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms