Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ClppO88696 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.37□□□□□ -0.11
ClppO88696 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
ClppO88696 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.37□□□□□ -0.11
ClppO88696 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ClppO88696 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.37□□□□□ -0.11
ClppO88696 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ClppO88696 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.37□□□□□ -0.11
ClppO88696 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.37□□□□□ -0.11
ClppO88696 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.37□□□□□ -0.11
ClppO88696 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.37□□□□□ -0.11
ClppO88696 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ClppO88696 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.37□□□□□ -0.11
ClppO88696 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ClppO88696 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ClppO88696 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.37□□□□□ -0.11
ClppO88696 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClppO88696 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ClppO88696 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ClppO88696 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.36□□□□□ -0.11
ClppO88696 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ClppO88696 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.36□□□□□ -0.11
ClppO88696 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.36□□□□□ -0.11
ClppO88696 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ClppO88696 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClppO88696 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ClppO88696 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ClppO88696 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.35□□□□□ -0.11
ClppO88696 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.35□□□□□ -0.11
ClppO88696 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.35□□□□□ -0.11
ClppO88696 Gm13365-201ENSMUST00000121188 973 ntBASIC14.35□□□□□ -0.11
ClppO88696 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ClppO88696 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Mir6990-201ENSMUST00000183724 91 ntBASIC14.35□□□□□ -0.11
ClppO88696 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.35□□□□□ -0.11
ClppO88696 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.35□□□□□ -0.11
ClppO88696 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ClppO88696 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ClppO88696 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClppO88696 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms