Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cldn1O88551 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Cldn1O88551 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.62□□□□□ -0.39
Cldn1O88551 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cldn1O88551 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Cldn1O88551 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.62□□□□□ -0.39
Cldn1O88551 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
Cldn1O88551 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cldn1O88551 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Cldn1O88551 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.62□□□□□ -0.39
Cldn1O88551 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cldn1O88551 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.61□□□□□ -0.39
Cldn1O88551 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cldn1O88551 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.61□□□□□ -0.39
Cldn1O88551 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.61□□□□□ -0.39
Cldn1O88551 Gm15483-201ENSMUST00000120338 456 ntBASIC12.61□□□□□ -0.39
Cldn1O88551 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cldn1O88551 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cldn1O88551 Gm25857-201ENSMUST00000082788 129 ntBASIC12.61□□□□□ -0.39
Cldn1O88551 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cldn1O88551 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cldn1O88551 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.6□□□□□ -0.39
Cldn1O88551 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn1O88551 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.6□□□□□ -0.39
Cldn1O88551 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn1O88551 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cldn1O88551 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Cldn1O88551 Gm14767-201ENSMUST00000121559 586 ntBASIC12.6□□□□□ -0.39
Cldn1O88551 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.6□□□□□ -0.39
Cldn1O88551 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.6□□□□□ -0.39
Cldn1O88551 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn1O88551 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn1O88551 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cldn1O88551 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Cldn1O88551 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.6□□□□□ -0.39
Cldn1O88551 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cldn1O88551 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.6□□□□□ -0.39
Cldn1O88551 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms