Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.77■□□□□ 0.6
Ubr1O70481 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.77■□□□□ 0.6
Ubr1O70481 Gm19078-201ENSMUST00000206311 727 ntBASIC18.77■□□□□ 0.6
Ubr1O70481 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ubr1O70481 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ubr1O70481 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ubr1O70481 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Ubr1O70481 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Ubr1O70481 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.76■□□□□ 0.59
Ubr1O70481 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ubr1O70481 Gm13829-201ENSMUST00000119600 138 ntBASIC18.76■□□□□ 0.59
Ubr1O70481 Gm9002-201ENSMUST00000178437 499 ntBASIC18.76■□□□□ 0.59
Ubr1O70481 Gm4804-201ENSMUST00000182234 999 ntBASIC18.76■□□□□ 0.59
Ubr1O70481 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.76■□□□□ 0.59
Ubr1O70481 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.76■□□□□ 0.59
Ubr1O70481 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Mir497b-201ENSMUST00000093601 125 ntBASIC18.76■□□□□ 0.59
Ubr1O70481 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ubr1O70481 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ubr1O70481 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ubr1O70481 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ubr1O70481 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
Ubr1O70481 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.76■□□□□ 0.59
Ubr1O70481 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.76■□□□□ 0.59
Ubr1O70481 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.76■□□□□ 0.59
Ubr1O70481 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.76■□□□□ 0.59
Ubr1O70481 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ubr1O70481 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18.75■□□□□ 0.59
Ubr1O70481 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 AC159196.2-201ENSMUST00000224082 1622 ntBASIC18.75■□□□□ 0.59
Ubr1O70481 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ubr1O70481 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Gm4081-201ENSMUST00000195287 1838 ntBASIC18.75■□□□□ 0.59
Ubr1O70481 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ubr1O70481 Gm15806-201ENSMUST00000120696 955 ntBASIC18.75■□□□□ 0.59
Ubr1O70481 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.75■□□□□ 0.59
Ubr1O70481 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.75■□□□□ 0.59
Ubr1O70481 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ubr1O70481 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubr1O70481 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ubr1O70481 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubr1O70481 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ubr1O70481 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubr1O70481 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ubr1O70481 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Ubr1O70481 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.74■□□□□ 0.59
Ubr1O70481 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubr1O70481 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubr1O70481 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubr1O70481 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ubr1O70481 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.74■□□□□ 0.59
Ubr1O70481 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ubr1O70481 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ubr1O70481 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ubr1O70481 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Ubr1O70481 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ubr1O70481 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms