Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Mir6990-201ENSMUST00000183724 91 ntBASIC14.51□□□□□ -0.09
Pdlim1O70400 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.51□□□□□ -0.09
Pdlim1O70400 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Pdlim1O70400 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdlim1O70400 Rubie-203ENSMUST00000227803 2430 ntBASIC14.51□□□□□ -0.09
Pdlim1O70400 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.51□□□□□ -0.09
Pdlim1O70400 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.5□□□□□ -0.09
Pdlim1O70400 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdlim1O70400 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Pdlim1O70400 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.5□□□□□ -0.09
Pdlim1O70400 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Gm25287-201ENSMUST00000103846 110 ntBASIC14.5□□□□□ -0.09
Pdlim1O70400 Gm22918-201ENSMUST00000103855 110 ntBASIC14.5□□□□□ -0.09
Pdlim1O70400 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.5□□□□□ -0.09
Pdlim1O70400 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.5□□□□□ -0.09
Pdlim1O70400 Gm38225-201ENSMUST00000194001 393 ntBASIC14.5□□□□□ -0.09
Pdlim1O70400 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdlim1O70400 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.5□□□□□ -0.09
Pdlim1O70400 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pdlim1O70400 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
Pdlim1O70400 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdlim1O70400 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Pdlim1O70400 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.49□□□□□ -0.09
Pdlim1O70400 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Gm43575-201ENSMUST00000196420 516 ntBASIC14.49□□□□□ -0.09
Pdlim1O70400 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.49□□□□□ -0.09
Pdlim1O70400 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.49□□□□□ -0.09
Pdlim1O70400 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdlim1O70400 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.49□□□□□ -0.09
Pdlim1O70400 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.49□□□□□ -0.09
Pdlim1O70400 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pdlim1O70400 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pdlim1O70400 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Gm23935-201ENSMUST00000102303 57 ntBASIC14.48□□□□□ -0.09
Pdlim1O70400 Gm24270-201ENSMUST00000102326 57 ntBASIC14.48□□□□□ -0.09
Pdlim1O70400 Gm24245-201ENSMUST00000157318 57 ntBASIC14.48□□□□□ -0.09
Pdlim1O70400 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.48□□□□□ -0.09
Pdlim1O70400 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.48□□□□□ -0.09
Pdlim1O70400 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.48□□□□□ -0.09
Pdlim1O70400 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.48□□□□□ -0.09
Pdlim1O70400 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.48□□□□□ -0.09
Pdlim1O70400 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdlim1O70400 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pdlim1O70400 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms