Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pdlim3O70209 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pdlim3O70209 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim3O70209 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Pdlim3O70209 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Pdlim3O70209 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim3O70209 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.33□□□□□ -0.28
Pdlim3O70209 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.33□□□□□ -0.28
Pdlim3O70209 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.33□□□□□ -0.28
Pdlim3O70209 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.33□□□□□ -0.28
Pdlim3O70209 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.33□□□□□ -0.28
Pdlim3O70209 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim3O70209 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.33□□□□□ -0.28
Pdlim3O70209 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim3O70209 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Pdlim3O70209 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Pdlim3O70209 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim3O70209 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.32□□□□□ -0.28
Pdlim3O70209 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.32□□□□□ -0.28
Pdlim3O70209 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.32□□□□□ -0.28
Pdlim3O70209 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Pdlim3O70209 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.32□□□□□ -0.28
Pdlim3O70209 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pdlim3O70209 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pdlim3O70209 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.31□□□□□ -0.28
Pdlim3O70209 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms