Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.93□□□□□ -0.18
Rdh5O55240 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.93□□□□□ -0.18
Rdh5O55240 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rdh5O55240 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rdh5O55240 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rdh5O55240 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rdh5O55240 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rdh5O55240 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rdh5O55240 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.93□□□□□ -0.18
Rdh5O55240 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.93□□□□□ -0.18
Rdh5O55240 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rdh5O55240 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rdh5O55240 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rdh5O55240 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rdh5O55240 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Rdh5O55240 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Gm25925-201ENSMUST00000158314 306 ntBASIC13.92□□□□□ -0.18
Rdh5O55240 Gm43575-201ENSMUST00000196420 516 ntBASIC13.92□□□□□ -0.18
Rdh5O55240 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.92□□□□□ -0.18
Rdh5O55240 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rdh5O55240 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Rdh5O55240 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rdh5O55240 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rdh5O55240 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rdh5O55240 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Rdh5O55240 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Rdh5O55240 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Rdh5O55240 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.91□□□□□ -0.18
Rdh5O55240 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Rdh5O55240 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.91□□□□□ -0.18
Rdh5O55240 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.91□□□□□ -0.18
Rdh5O55240 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rdh5O55240 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.91□□□□□ -0.18
Rdh5O55240 Gm17968-201ENSMUST00000194902 784 ntBASIC13.91□□□□□ -0.18
Rdh5O55240 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Rdh5O55240 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rdh5O55240 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Rdh5O55240 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.91□□□□□ -0.18
Rdh5O55240 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.9□□□□□ -0.18
Rdh5O55240 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.9□□□□□ -0.18
Rdh5O55240 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Gm14822-201ENSMUST00000122247 291 ntBASIC13.9□□□□□ -0.18
Rdh5O55240 Gm16026-204ENSMUST00000162652 683 ntBASIC13.9□□□□□ -0.18
Rdh5O55240 Gm27301-201ENSMUST00000184012 127 ntBASIC13.9□□□□□ -0.18
Rdh5O55240 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.9□□□□□ -0.18
Rdh5O55240 Gm45747-201ENSMUST00000212203 999 ntBASIC13.9□□□□□ -0.18
Rdh5O55240 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.9□□□□□ -0.18
Rdh5O55240 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.9□□□□□ -0.18
Rdh5O55240 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rdh5O55240 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.9□□□□□ -0.18
Rdh5O55240 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Rdh5O55240 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Rdh5O55240 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rdh5O55240 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms