Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.12■□□□□ 0.17
Trdmt1O55055 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.12■□□□□ 0.17
Trdmt1O55055 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.12■□□□□ 0.17
Trdmt1O55055 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Trdmt1O55055 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.11■□□□□ 0.17
Trdmt1O55055 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.11■□□□□ 0.17
Trdmt1O55055 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.11■□□□□ 0.17
Trdmt1O55055 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trdmt1O55055 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trdmt1O55055 Gm11478-201ENSMUST00000117851 599 ntBASIC16.1■□□□□ 0.17
Trdmt1O55055 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.1■□□□□ 0.17
Trdmt1O55055 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Gm10275-202ENSMUST00000168697 495 ntBASIC16.1■□□□□ 0.17
Trdmt1O55055 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trdmt1O55055 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.1■□□□□ 0.17
Trdmt1O55055 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.1■□□□□ 0.17
Trdmt1O55055 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trdmt1O55055 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trdmt1O55055 Gm10275-201ENSMUST00000092620 635 ntBASIC16.1■□□□□ 0.17
Trdmt1O55055 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.1■□□□□ 0.17
Trdmt1O55055 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trdmt1O55055 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.1■□□□□ 0.17
Trdmt1O55055 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trdmt1O55055 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.09■□□□□ 0.17
Trdmt1O55055 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Gm12585-201ENSMUST00000117307 290 ntBASIC16.09■□□□□ 0.17
Trdmt1O55055 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.09■□□□□ 0.17
Trdmt1O55055 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.09■□□□□ 0.17
Trdmt1O55055 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trdmt1O55055 Gm33320-201ENSMUST00000192232 530 ntBASIC16.09■□□□□ 0.17
Trdmt1O55055 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.09■□□□□ 0.17
Trdmt1O55055 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trdmt1O55055 Gm18624-201ENSMUST00000220966 658 ntBASIC16.09■□□□□ 0.17
Trdmt1O55055 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.09■□□□□ 0.17
Trdmt1O55055 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.09■□□□□ 0.17
Trdmt1O55055 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdmt1O55055 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.09■□□□□ 0.17
Trdmt1O55055 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.08■□□□□ 0.17
Trdmt1O55055 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trdmt1O55055 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.08■□□□□ 0.17
Trdmt1O55055 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trdmt1O55055 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trdmt1O55055 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms