Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Rnf13O54965 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf13O54965 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Rnf13O54965 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.34□□□□□ -0.27
Rnf13O54965 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Rnf13O54965 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf13O54965 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf13O54965 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf13O54965 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.33□□□□□ -0.27
Rnf13O54965 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rnf13O54965 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Rnf13O54965 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.33□□□□□ -0.28
Rnf13O54965 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf13O54965 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.33□□□□□ -0.28
Rnf13O54965 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.33□□□□□ -0.28
Rnf13O54965 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf13O54965 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.33□□□□□ -0.28
Rnf13O54965 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rnf13O54965 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.33□□□□□ -0.28
Rnf13O54965 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rnf13O54965 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Rnf13O54965 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rnf13O54965 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf13O54965 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf13O54965 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rnf13O54965 Gm11780-201ENSMUST00000136880 516 ntBASIC13.32□□□□□ -0.28
Rnf13O54965 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rnf13O54965 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf13O54965 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.32□□□□□ -0.28
Rnf13O54965 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf13O54965 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.32□□□□□ -0.28
Rnf13O54965 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rnf13O54965 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rnf13O54965 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.31□□□□□ -0.28
Rnf13O54965 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rnf13O54965 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms