Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarce1O54941 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.48■□□□□ 0.39
Smarce1O54941 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.48■□□□□ 0.39
Smarce1O54941 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smarce1O54941 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Smarce1O54941 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smarce1O54941 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smarce1O54941 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.48■□□□□ 0.39
Smarce1O54941 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.48■□□□□ 0.39
Smarce1O54941 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.48■□□□□ 0.39
Smarce1O54941 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.48■□□□□ 0.39
Smarce1O54941 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smarce1O54941 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smarce1O54941 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smarce1O54941 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smarce1O54941 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.47■□□□□ 0.39
Smarce1O54941 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.47■□□□□ 0.39
Smarce1O54941 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Smarce1O54941 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.47■□□□□ 0.39
Smarce1O54941 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.47■□□□□ 0.39
Smarce1O54941 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Smarce1O54941 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.47■□□□□ 0.39
Smarce1O54941 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.47■□□□□ 0.39
Smarce1O54941 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.47■□□□□ 0.39
Smarce1O54941 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarce1O54941 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smarce1O54941 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Smarce1O54941 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Smarce1O54941 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Smarce1O54941 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC17.47■□□□□ 0.39
Smarce1O54941 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smarce1O54941 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Smarce1O54941 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Smarce1O54941 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Smarce1O54941 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.46■□□□□ 0.39
Smarce1O54941 Gm7977-201ENSMUST00000193787 748 ntBASIC17.46■□□□□ 0.39
Smarce1O54941 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.46■□□□□ 0.39
Smarce1O54941 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
Smarce1O54941 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.46■□□□□ 0.39
Smarce1O54941 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Smarce1O54941 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smarce1O54941 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smarce1O54941 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms