Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prrt1O35449 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prrt1O35449 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prrt1O35449 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prrt1O35449 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prrt1O35449 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.44□□□□□ -0.42
Prrt1O35449 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Prrt1O35449 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Prrt1O35449 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.43□□□□□ -0.42
Prrt1O35449 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.43□□□□□ -0.42
Prrt1O35449 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Prrt1O35449 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prrt1O35449 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Prrt1O35449 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.42□□□□□ -0.42
Prrt1O35449 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.42□□□□□ -0.42
Prrt1O35449 Gm9013-201ENSMUST00000132939 882 ntBASIC12.42□□□□□ -0.42
Prrt1O35449 Rprl3-201ENSMUST00000157400 290 ntBASIC12.42□□□□□ -0.42
Prrt1O35449 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Gm18622-201ENSMUST00000219361 595 ntBASIC12.42□□□□□ -0.42
Prrt1O35449 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Prrt1O35449 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Prrt1O35449 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Prrt1O35449 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Prrt1O35449 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prrt1O35449 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Prrt1O35449 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Prrt1O35449 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.41□□□□□ -0.42
Prrt1O35449 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.41□□□□□ -0.42
Prrt1O35449 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.41□□□□□ -0.42
Prrt1O35449 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.41□□□□□ -0.42
Prrt1O35449 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.41□□□□□ -0.42
Prrt1O35449 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.41□□□□□ -0.42
Prrt1O35449 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Prrt1O35449 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.41□□□□□ -0.42
Prrt1O35449 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prrt1O35449 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms