Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Efnb3O35393 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Efnb3O35393 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Efnb3O35393 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Efnb3O35393 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Efnb3O35393 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Efnb3O35393 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Efnb3O35393 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Efnb3O35393 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Efnb3O35393 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Efnb3O35393 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC11.63□□□□□ -0.55
Efnb3O35393 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.63□□□□□ -0.55
Efnb3O35393 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Efnb3O35393 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Efnb3O35393 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.63□□□□□ -0.55
Efnb3O35393 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.63□□□□□ -0.55
Efnb3O35393 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Efnb3O35393 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.63□□□□□ -0.55
Efnb3O35393 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.63□□□□□ -0.55
Efnb3O35393 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Gm10499-201ENSMUST00000174094 934 ntBASIC11.63□□□□□ -0.55
Efnb3O35393 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Efnb3O35393 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Efnb3O35393 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.63□□□□□ -0.55
Efnb3O35393 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Efnb3O35393 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.63□□□□□ -0.55
Efnb3O35393 Gm8655-201ENSMUST00000221159 852 ntBASIC11.63□□□□□ -0.55
Efnb3O35393 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.63□□□□□ -0.55
Efnb3O35393 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Efnb3O35393 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Efnb3O35393 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Efnb3O35393 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Efnb3O35393 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.63□□□□□ -0.55
Efnb3O35393 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.62□□□□□ -0.55
Efnb3O35393 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Efnb3O35393 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Efnb3O35393 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.62□□□□□ -0.55
Efnb3O35393 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Efnb3O35393 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.62□□□□□ -0.55
Efnb3O35393 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.62□□□□□ -0.55
Efnb3O35393 Gm12895-201ENSMUST00000122214 226 ntBASIC11.62□□□□□ -0.55
Efnb3O35393 Gm28033-201ENSMUST00000184224 96 ntBASIC11.62□□□□□ -0.55
Efnb3O35393 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.62□□□□□ -0.55
Efnb3O35393 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.62□□□□□ -0.55
Efnb3O35393 Gm7506-201ENSMUST00000207758 815 ntBASIC11.62□□□□□ -0.55
Efnb3O35393 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Efnb3O35393 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Efnb3O35393 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.62□□□□□ -0.55
Efnb3O35393 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Efnb3O35393 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms