Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Gm43630-201ENSMUST00000201550 776 ntBASIC18.66■□□□□ 0.58
Col15a1O35206 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Col15a1O35206 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Col15a1O35206 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Col15a1O35206 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Gm15957-201ENSMUST00000118893 974 ntBASIC18.65■□□□□ 0.58
Col15a1O35206 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.65■□□□□ 0.58
Col15a1O35206 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.65■□□□□ 0.58
Col15a1O35206 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.65■□□□□ 0.58
Col15a1O35206 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.65■□□□□ 0.58
Col15a1O35206 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col15a1O35206 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col15a1O35206 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC18.64■□□□□ 0.57
Col15a1O35206 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.64■□□□□ 0.57
Col15a1O35206 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Col15a1O35206 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.64■□□□□ 0.57
Col15a1O35206 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col15a1O35206 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Col15a1O35206 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col15a1O35206 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Col15a1O35206 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col15a1O35206 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Col15a1O35206 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col15a1O35206 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.63■□□□□ 0.57
Col15a1O35206 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col15a1O35206 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col15a1O35206 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.63■□□□□ 0.57
Col15a1O35206 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col15a1O35206 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.62■□□□□ 0.57
Col15a1O35206 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.62■□□□□ 0.57
Col15a1O35206 Gm11425-201ENSMUST00000119608 498 ntBASIC18.62■□□□□ 0.57
Col15a1O35206 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.62■□□□□ 0.57
Col15a1O35206 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC18.62■□□□□ 0.57
Col15a1O35206 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC18.62■□□□□ 0.57
Col15a1O35206 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Col15a1O35206 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Gm9396-201ENSMUST00000076703 567 ntBASIC18.62■□□□□ 0.57
Col15a1O35206 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Col15a1O35206 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Col15a1O35206 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col15a1O35206 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col15a1O35206 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.61■□□□□ 0.57
Col15a1O35206 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.61■□□□□ 0.57
Col15a1O35206 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col15a1O35206 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.61■□□□□ 0.57
Col15a1O35206 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Col15a1O35206 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col15a1O35206 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms