Protein–RNA interactions for Protein: O08859

Tnfaip6, Tumor necrosis factor-inducible gene 6 protein, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip6O08859 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.11□□□□□ -0.47
Tnfaip6O08859 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Gm17271-201ENSMUST00000165535 355 ntBASIC12.11□□□□□ -0.47
Tnfaip6O08859 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.11□□□□□ -0.47
Tnfaip6O08859 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfaip6O08859 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Gm16026-204ENSMUST00000162652 683 ntBASIC12.1□□□□□ -0.47
Tnfaip6O08859 Mir3113-201ENSMUST00000175478 76 ntBASIC12.1□□□□□ -0.47
Tnfaip6O08859 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.1□□□□□ -0.47
Tnfaip6O08859 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.1□□□□□ -0.47
Tnfaip6O08859 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.1□□□□□ -0.47
Tnfaip6O08859 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfaip6O08859 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Gm15467-201ENSMUST00000120582 445 ntBASIC12.09□□□□□ -0.47
Tnfaip6O08859 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Tnfaip6O08859 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Gm44492-201ENSMUST00000197012 141 ntBASIC12.09□□□□□ -0.47
Tnfaip6O08859 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Gm45747-201ENSMUST00000212203 999 ntBASIC12.09□□□□□ -0.47
Tnfaip6O08859 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfaip6O08859 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms