Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.13□□□□□ -0.31
Raet1cO08604 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Raet1cO08604 Gm2272-201ENSMUST00000194903 582 ntBASIC13.13□□□□□ -0.31
Raet1cO08604 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.13□□□□□ -0.31
Raet1cO08604 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Raet1cO08604 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.13□□□□□ -0.31
Raet1cO08604 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Raet1cO08604 Gm5364-201ENSMUST00000216789 889 ntBASIC13.13□□□□□ -0.31
Raet1cO08604 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.13□□□□□ -0.31
Raet1cO08604 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Raet1cO08604 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.13□□□□□ -0.31
Raet1cO08604 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Raet1cO08604 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Raet1cO08604 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.12□□□□□ -0.31
Raet1cO08604 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.12□□□□□ -0.31
Raet1cO08604 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Raet1cO08604 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Raet1cO08604 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.12□□□□□ -0.31
Raet1cO08604 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Raet1cO08604 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Raet1cO08604 Gm5177-201ENSMUST00000183092 997 ntBASIC13.12□□□□□ -0.31
Raet1cO08604 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.12□□□□□ -0.31
Raet1cO08604 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.12□□□□□ -0.31
Raet1cO08604 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.12□□□□□ -0.31
Raet1cO08604 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Raet1cO08604 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Raet1cO08604 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Raet1cO08604 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Raet1cO08604 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Raet1cO08604 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.11□□□□□ -0.31
Raet1cO08604 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Raet1cO08604 Gm16198-201ENSMUST00000118766 670 ntBASIC13.11□□□□□ -0.31
Raet1cO08604 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.11□□□□□ -0.31
Raet1cO08604 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Thap2-203ENSMUST00000218989 527 ntBASIC13.11□□□□□ -0.31
Raet1cO08604 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.11□□□□□ -0.31
Raet1cO08604 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.11□□□□□ -0.31
Raet1cO08604 Gm10154-201ENSMUST00000084445 354 ntBASIC13.11□□□□□ -0.31
Raet1cO08604 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Raet1cO08604 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Raet1cO08604 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Raet1cO08604 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms