Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Gm27646-201ENSMUST00000183989 110 ntBASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.42□□□□□ -0.26
Shisa8J3QNX5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Shisa8J3QNX5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.41□□□□□ -0.26
Shisa8J3QNX5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.41□□□□□ -0.26
Shisa8J3QNX5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Shisa8J3QNX5 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa8J3QNX5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms