Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim55G3X8Y1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim55G3X8Y1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Gm12008-201ENSMUST00000117791 755 ntBASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Gm6433-201ENSMUST00000118634 875 ntBASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.13■□□□□ 0.01
Trim55G3X8Y1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim55G3X8Y1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.13■□□□□ 0.01
Trim55G3X8Y1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Gm43799-201ENSMUST00000201845 579 ntBASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Gm21814-202ENSMUST00000203277 873 ntBASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim55G3X8Y1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim55G3X8Y1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim55G3X8Y1 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trim55G3X8Y1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim55G3X8Y1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms