Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NpcdF8VQB8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.62■□□□□ 0.41
NpcdF8VQB8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NpcdF8VQB8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NpcdF8VQB8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.61■□□□□ 0.41
NpcdF8VQB8 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.61■□□□□ 0.41
NpcdF8VQB8 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.61■□□□□ 0.41
NpcdF8VQB8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NpcdF8VQB8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Mir1247-201ENSMUST00000116706 82 ntBASIC17.6■□□□□ 0.41
NpcdF8VQB8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Gm5479-201ENSMUST00000160578 435 ntBASIC17.6■□□□□ 0.41
NpcdF8VQB8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.6■□□□□ 0.41
NpcdF8VQB8 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.6■□□□□ 0.41
NpcdF8VQB8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NpcdF8VQB8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.6■□□□□ 0.41
NpcdF8VQB8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
NpcdF8VQB8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NpcdF8VQB8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NpcdF8VQB8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.59■□□□□ 0.41
NpcdF8VQB8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NpcdF8VQB8 Gm29310-201ENSMUST00000185468 696 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms