Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Gm27680-201ENSMUST00000184192 160 ntBASIC14.9□□□□□ -0.02
Ccdc149F6V035 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Gm44344-201ENSMUST00000200287 129 ntBASIC14.9□□□□□ -0.02
Ccdc149F6V035 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc149F6V035 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.89□□□□□ -0.03
Ccdc149F6V035 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.89□□□□□ -0.03
Ccdc149F6V035 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.89□□□□□ -0.03
Ccdc149F6V035 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccdc149F6V035 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Gm5866-201ENSMUST00000177881 973 ntBASIC14.88□□□□□ -0.03
Ccdc149F6V035 Gm9726-201ENSMUST00000180321 678 ntBASIC14.88□□□□□ -0.03
Ccdc149F6V035 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Gm9063-201ENSMUST00000223299 582 ntBASIC14.88□□□□□ -0.03
Ccdc149F6V035 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccdc149F6V035 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc149F6V035 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms